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Ubiquitin Drug Discovery and Diagnostics 2010

Date: August 23, 2010 — August 25, 2010
Location: Four Seasons Hotel, Philadelphia, PA

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Registration opens at 7:00am each day
 
Tuesday, August 24, 2010 
 
7:00am  Continental Breakfast (Ballroom Foyer)
 
8:00am  Welcome by the Conference Chair
                Dr. Joseph Bolen, CSO, Millennium: The Takeda Oncology Company
 
8:15am  Welcome by the Hon. Michael A. Nutter, Mayor of Philadelphia
 
8:30am  Keynote Address 
               The Ubiquitin-Proteasome Pathway and Drug Development:
                Looking Backward and Looking Forward
                Dr. Alfred L. Goldberg Professor of Cell Biology
                Harvard Medical School, Boston MA
 

Session 1 Understanding the Ubiquitome
Session Chair:  Dr. Joseph Bolen, Millennium: The Takeda Oncology Company
 
9:15am  Assembly and Structure of the Eukaryotic Proteasome
               Dr. Mark Hochstrasser
               Yale University
 
9:40am  Proteomic and informatic approaches in the study of the Ubiquitin Pathway
                Dr. Wade Harper
                Harvard Medical School
  
10:05am Coffee Break
 
10:40am Modulation of prion formation by the ubiquitin proteasome system
                 and actin cytoskeleton
                 Dr. Keith D. Wilkinson, Emory University
 
11:05am Postsynaptic mechanisms of ubiquitination and de-ubiquitination involved in
                 synapse structure and function
                 Dr. Gentry Patrick
                 University of California, San Diego
 
11:30am Chemically ubiquitylated PCNA as a probe for eukaryotic translesion synthesis
                 Dr. Zhihao Zhuang
                 University of Delaware
 
11:45am Modulating activity of a deubiquitinating enzyme OTUB1 via phosphorylatio
                 Dr. Mariola Edelmann
                 Mississippi State University
 
12:00pm Lunch in the Swann Restaurant
 

Session 2 Targeting Deubiquitylases for Therapy
Session Chair: Dr. Marco Gottardis, Bristol-Myers Squibb
 
1:30pm  Enzyme regulatory mechanisms of USP7
                Dr. James Ernst
                Genentech, Inc.

1:55pm  Ubiquitin Specific Proteases as novel drug targets – A case study
                Dr. Jonathan D. Wrigley
                AstraZeneca
  
2:20pm  Discovery of Ubiquitin Isopeptidase Inhibitors             
                Dr. Ben Nicholson
                Progenra, Inc.
 
2:45pm The EXCRT-DUBs USP8 and AMSH Modulate ESCRT-0 to Control Receptor
                Transit through the Sorting Endosome
                 Dr. Piers Nash 
                 University of Chicago
 
3:00pm  Coffee Break
 
3:20pm  Deubiquitylases and exploration of chemical space
                Dr. Christopher P. Austin
                NIH Chemical Genomics Center
 
3:40pm  Quantitative assays for classification of ubiquitin-proteasome drugs reveal a
                selective inhibitor of p97 ATPase
                Dr. Tsui-Fen Chou
                Howard Hughes Medical Institute, California Institute of Technology
 
3:55pm  Specificity of DUB inhibitors in cells profiled by
                activity-based chemical proteomics
                Dr. Benedikt M. Kessler
                Oxford University
 
4:20pm  Inhibition of proteasomal deubiquitinating enzyme Usp14
               Dr. Dan Finley
               Harvard University
 
4:45pm  Dubya, an IAP-directed deubiquitylase controls Drosophila cell death
                Dr. Michael J. Thomenius
                Duke University Medical Center
 
5:00pm  Business Roundtable Discussion Groups
  
(1) Biotech and Pharma Partnership: The new face of the industry
Chair: Dr. Tom Argentieri, Sr. Director of Business Development, Progenra Inc.
Panel:  Ms. Kate Shay, J.D., Corporate Law, Duane Morris, Philadelphia;
Dr. Gad Soffer, Director, Business Development, Celgene Inc.
 
Many forces are at work to change the pharma industry. Lack of drug approvals to address for unmet needs, health care reform, and mergers of major pharmaceutical companies have created a new business climate. The drug discovery model is changing rapidly as pharma tries to reduce its cost and yet keep core R and D functions. What role will small biotech play in filling the pipeline of pharma development? Does the ubiquitome provide an opportunity for the discovery of novel drugs?

(2) Academia and Industry Partnership: Translational Research
Chair:  Dr. David Counts, Sr. Director Business Development, Progenra Inc.
Panel: Robert C. Netter, Jr., Ph.D., J.D., Patent Attorney, Dann Dorfman Harrell Skillman, Philadelphia; Dr. Neil Wilkie, Programme Manger, ITI Life Science, Scotland
 
Unprecedented developments in “omics” driven science has created exciting opportunities for drug discovery in academia. NIH Road Map initiatives solicit “translational medicine” grant applications that are having a direct impact on drug discovery and diagnostics. At the same time, during economic stress and the resulting lack of jobs in the private sector, more academic researchers are competing for limited amounts of federal funds. There has never been the greater need to establish academic and industry partnerships to bring new technologies to the market. Academic colleagues are encouraged to offer their views on ways academic labs can develop joint programs with biotechs.

(3) Role of the NIH in Drug Discovery
Chair: Dr. David Newman, Chief, NPB, DTP, NCI-FCRDC
Panel: Dr. Christopher Austin, Director, Chemical Genomics Center, NIH;
Dr. Ben Nicholson, Director, Biology, Progenra Inc.
 
Historically the NIH has played a key role in development of drugs, many of which are currently in use. Recent bold actions taken by the NIH have created new programs that have the potential to change the face of drug discovery. Natural products have been the source of many marketed drugs, and the NIH has made its extensive collection of natural products extracts available to countless drug discovery (screening) campaigns. In addition, the National Center for Chemical Genomics at NIH is spearheading programs to identify small molecule probes that will act as key tools for validating drug targets and as important drug leads. Although these NIH programs are not well publicized, scientists in academia and industry are encouraged to benefit from the opportunities that they provide.
 
6:00pm  Poster Viewing & Cocktail Hour
 
7:30pm  Dinner in the Ballroom Rounds
 

Wednesday, August 25, 2010  
 
7:00am  Continental Breakfast in the Ballroom Foyer

Session 3 Targeting E3 ligases for therapy
Session Chair:  Dr. Arthur Haas, Louisiana State University
 
8:30am  Novel Mechanism-based E1 Inhibitors in Drug Discovery
               Dr. Jesse Chen
               Millennium: The Takeda Oncology Company
 
8:55am Structural Insights and Functional Complexity of E2 - RING Finger E3 Interactions
               Dr. Allan Weissman
               National Cancer Institute at Frederick (MD)
 
9:20am  Regualation of the cell cycle by the SCFCyclin F ubiquitin ligase complex
               Dr. Michele Pagano
               Howard Hughes Medical Institute, New York University School of Medicine
 
9:45am Mechanism for recognition of polyubiquitin chains: Balancing affinity through
               interplay between multivalent binding and dynamics
               Dr. Leo Spyracopoulos
               University of Alberta
 
10:00am Coffee Break
 
10:40am Identification of E3 Ligase Inhibitors Using a Novel Assay
                Dr. Michael Eddins
                Progenra, Inc.  
 
11:05am Modulation of Parkin E3 Ligase Activity with Small Molecules
                 Dr. Jennifer Johnston
                 Elan Pharmaceuticals, Inc.  
 
11:30am HectH9 inhibitors as potential anti-cancer therapeutics
                 Dr. Stefanie Peter
                 University of Würzburg
 
11:45am KF-1 ubiquitin ligase: anxiety suppressor model
                Dr. Tamotsu Hashimoto-Gotoh
                Kyoto Prefectural University of Medicine
 
12:00pm Lunch in Swann Restaurant

Session 4 Ubiquitin Pathway Inhibitors in the Clinic  
Session Chair:  Dr. Keith Wilkinson, Emory University
 
1:30pm ONX0912:  an in vitro and in vivo evaluation of an orally bioavailable proteasome
               inhibitor
               Dr. Shirin Kapur
               Onyx Pharmaceuticals
 
1:55pm  Proteomics of mitotic ubiquitome of Xenopus laevis embryo
                Dr. Jacek Kubiak
                University of Montreal
 
2:05pm  A Proteomics Approach to Profile Human Ubiquitome
               Dr. Yi Shi
               Baylor College of Medicine
 
2:20pm  Targeting Protein Degradatation as a Therapeutic Strategy in Myeloma   
                Dr. Kenneth Anderson
                Dana-Farber Cancer Institute
 
2:45pm Preventing the UPS-dependent degradation of frataxin, the protein defective in
               Friedreich’s Ataxia
               Dr. Silvia Fortuni
               University of Rome
  
3:00pm  Coffee Break
 
3:30pm   Role of proteasome inhibition in organ transplantation
                 Dr. E. Steve Woodle
                 University of Cincinnati
 
3:55pm Inhibition of NEDD8-activating enzyme for cancer treatment: Preclinical
               validation to clinical application of MLN4924
               Dr. Peter G. Smith
               Millennium: The Takeda Oncology Company
 
4:20pm  Effective Proteasome Inhibitors for Inflammation and Septic Shock
                Dr. Nilofer Qureshi
                University of Missouri, Kansas City
 
4:35pm  Autophagy inhibition for myeloma therapy
                Dr. Dan Vogl
                University of Pennsylvania
 
5:00pm   Conference Concludes
 

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